- a -

• AffineAligner() : musaline::AffineAligner< CostCalc >

- c -

• ConsolidatingAligner() : musaline::ConsolidatingAligner< CostCalc >
• cut_one_begin_off_align() : musaline::AffineAligner< CostCalc > , musaline::ConsolidatingAligner< CostCalc > , musaline::LinearAligner< CostCalc >
• cut_one_end_off_align() : musaline::AffineAligner< CostCalc > , musaline::ConsolidatingAligner< CostCalc > , musaline::LinearAligner< CostCalc >

- e -

• end_align() : musaline::AffineAligner< CostCalc > , musaline::ConsolidatingAligner< CostCalc > , musaline::LinearAligner< CostCalc >

- g -

• get_cost_calculator() : musaline::AffineAligner< CostCalc > , musaline::ConsolidatingAligner< CostCalc > , musaline::LinearAligner< CostCalc >
• global_align() : musaline::AffineAligner< CostCalc > , musaline::ConsolidatingAligner< CostCalc > , musaline::LinearAligner< CostCalc >

- i -

• initial_align() : musaline::AffineAligner< CostCalc > , musaline::ConsolidatingAligner< CostCalc > , musaline::LinearAligner< CostCalc >
• inside_align() : musaline::AffineAligner< CostCalc > , musaline::ConsolidatingAligner< CostCalc > , musaline::LinearAligner< CostCalc >

- l -

• LinearAligner() : musaline::LinearAligner< CostCalc >

- p -

• partial_align() : musaline::AffineAligner< CostCalc > , musaline::ConsolidatingAligner< CostCalc > , musaline::LinearAligner< CostCalc >

- s -

• semi_align() : musaline::AffineAligner< CostCalc > , musaline::ConsolidatingAligner< CostCalc > , musaline::LinearAligner< CostCalc >
• set_cost_calculator() : musaline::AffineAligner< CostCalc > , musaline::ConsolidatingAligner< CostCalc > , musaline::LinearAligner< CostCalc >